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Increasing tendency of urine protein is a risk factor for rapid eGFR decline in patients with CKD: A machine learning-based prediction model by using a big database
Inaguma, Daijo, Kitagawa, Akimitsu, Yanagiya, Ryosuke, Koseki, Akira, Iwamori, Toshiya, Kudo, Michiharu, Yuzawa, Yukio
Published in PLoS ONE (17.09.2020)
Published in PLoS ONE (17.09.2020)
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Journal Article
scTPC: a novel semisupervised deep clustering model for scRNA-seq data
Qiu, Yushan, Yang, Lingfei, Jiang, Hao, Zou, Quan
Published in Bioinformatics (Oxford, England) (02.05.2024)
Published in Bioinformatics (Oxford, England) (02.05.2024)
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Journal Article
pyNBS: a Python implementation for network-based stratification of tumor mutations
Huang, Justin K, Jia, Tongqiu, Carlin, Daniel E, Ideker, Trey
Published in Bioinformatics (15.08.2018)
Published in Bioinformatics (15.08.2018)
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Journal Article
PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
Singh, Gursimran, Chharia, Aviral, Upadhyay, Rahul, Kumar, Vinay, Longo, Luca
Published in PloS one (06.08.2025)
Published in PloS one (06.08.2025)
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Journal Article
COBRApy: COnstraints-Based Reconstruction and Analysis for Python
Ebrahim, Ali, Lerman, Joshua A, Palsson, Bernhard O, Hyduke, Daniel R
Published in BMC systems biology (08.08.2013)
Published in BMC systems biology (08.08.2013)
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Journal Article
Correct orchestration of federated learning generic algorithms: Python translation to CSP and verification by PAT
Djukic, Miodrag, Prokić, Ivan, Popovic, Miroslav, Ghilezan, Silvia, Popovic, Marko, Prokić, Simona
Published in International journal on software tools for technology transfer (01.02.2025)
Published in International journal on software tools for technology transfer (01.02.2025)
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Journal Article
Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison
Kuijpers, Lucas, Hornung, Bastian, van den Hout - van Vroonhoven, Mirjam C. G. N., van IJcken, Wilfred F. J., Grosveld, Frank, Mulugeta, Eskeatnaf
Published in BMC genomics (12.04.2024)
Published in BMC genomics (12.04.2024)
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Journal Article
Comparative Analysis of AI Models for Python Code Generation: A HumanEval Benchmark Study
Bayram, Ali, Menekse Dalveren, Gonca Gokce, Derawi, Mohammad
Published in Applied sciences (10.09.2025)
Published in Applied sciences (10.09.2025)
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Journal Article
SPOTting Model Parameters Using a Ready-Made Python Package
Houska, Tobias, Kraft, Philipp, Chamorro-Chavez, Alejandro, Breuer, Lutz
Published in PloS one (17.12.2015)
Published in PloS one (17.12.2015)
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Journal Article
GraphPyRec: A novel graph-based approach for fine-grained Python code recommendation
Zong, Xing, Zheng, Shang, Zou, Haitao, Yu, Hualong, Gao, Shang
Published in Science of computer programming (01.12.2024)
Published in Science of computer programming (01.12.2024)
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Journal Article
A conversion tool for translating Python-based machine learning models to structured text codes
Campos, Yasmin Adriane de Paula, Pereira, Paulo Haron da Silva, Duarte, Robson Aparecido, Perez, José Manuel Gonzalez Túbio, Pessin, Gustavo, Pinto, Thomas Vargas Barsante
Published in SoftwareX (01.02.2025)
Published in SoftwareX (01.02.2025)
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Journal Article
Opening the AI Black Box: Distilling Machine-Learned Algorithms into Code
Michaud, Eric J., Liao, Isaac, Lad, Vedang, Liu, Ziming, Mudide, Anish, Loughridge, Chloe, Guo, Zifan Carl, Kheirkhah, Tara Rezaei, Vukelić, Mateja, Tegmark, Max
Published in Entropy (Basel, Switzerland) (02.12.2024)
Published in Entropy (Basel, Switzerland) (02.12.2024)
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Journal Article