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    Bridging Python to Silicon: The SODA Toolchain
                                      
                                            Agostini, Nicolas Bohm,                              Curzel, Serena,                              Zhang, Jeff Jun,                              Limaye, Ankur,                              Tan, Cheng,                              Amatya, Vinay,                              Minutoli, Marco,                              Castellana, Vito Giovanni,                              Manzano, Joseph,                              Brooks, David,                              Wei, Gu-Yeon,                              Tumeo, Antonino                              
Published in IEEE MICRO (01.09.2022)
                   
      
      
                                                  Published in IEEE MICRO (01.09.2022)
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          scTPC: a novel semisupervised deep clustering model for scRNA-seq data
                                      
                                            Qiu, Yushan,                              Yang, Lingfei,                              Jiang, Hao,                              Zou, Quan                              
Published in Bioinformatics (Oxford, England) (02.05.2024)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (02.05.2024)
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          New Python-based methods for data processing
                                      
                                            Sauter, Nicholas K.,                              Hattne, Johan,                              Grosse-Kunstleve, Ralf W.,                              Echols, Nathaniel                              
Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
                   
      
      
                                                  Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
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          Visual dynamics: a WEB application for molecular dynamics simulation using GROMACS
                                      
                                            Vieira, Ivo Henrique Provensi,                              Botelho, Eduardo Buganemi,                              de Souza Gomes, Thales Junior,                              Kist, Roger,                              Caceres, Rafael Andrade,                              Zanchi, Fernando Berton                              
Published in BMC bioinformatics (22.03.2023)
                   
      
      
                                                  Published in BMC bioinformatics (22.03.2023)
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          Increasing tendency of urine protein is a risk factor for rapid eGFR decline in patients with CKD: A machine learning-based prediction model by using a big database
                                      
                                            Inaguma, Daijo,                              Kitagawa, Akimitsu,                              Yanagiya, Ryosuke,                              Koseki, Akira,                              Iwamori, Toshiya,                              Kudo, Michiharu,                              Yuzawa, Yukio                              
Published in PLoS ONE (17.09.2020)
                   
      
      
                                                  Published in PLoS ONE (17.09.2020)
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          altAFplotter: a web app for reliable UPD detection in NGS diagnostics
                                      
                                            Radtke, Maximilian,                              Moch, Johanna,                              Hentschel, Julia,                              Schumann, Isabell                              
Published in BMC bioinformatics (12.09.2024)
                   
      
      
                                                  Published in BMC bioinformatics (12.09.2024)
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          YSMR: a video tracking and analysis program for bacterial motility
                                      
                                            Schwanbeck, Julian,                              Oehmig, Ines,                              Dretzke, Jerôme,                              Zautner, Andreas E.,                              Groß, Uwe,                              Bohne, Wolfgang                              
Published in BMC bioinformatics (29.04.2020)
                   
      
      
                                                  Published in BMC bioinformatics (29.04.2020)
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          GraphPyRec: A novel graph-based approach for fine-grained Python code recommendation
                                      
                                            Zong, Xing,                              Zheng, Shang,                              Zou, Haitao,                              Yu, Hualong,                              Gao, Shang                              
Published in Science of computer programming (01.12.2024)
                   
      
      
                                                  Published in Science of computer programming (01.12.2024)
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          A conversion tool for translating Python-based machine learning models to structured text codes
                                      
                                            Campos, Yasmin Adriane de Paula,                              Pereira, Paulo Haron da Silva,                              Duarte, Robson Aparecido,                              Perez, José Manuel Gonzalez Túbio,                              Pessin, Gustavo,                              Pinto, Thomas Vargas Barsante                              
Published in SoftwareX (01.02.2025)
                   
      
      
                                                  Published in SoftwareX (01.02.2025)
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          Opening the AI Black Box: Distilling Machine-Learned Algorithms into Code
                                      
                                            Michaud, Eric J.,                              Liao, Isaac,                              Lad, Vedang,                              Liu, Ziming,                              Mudide, Anish,                              Loughridge, Chloe,                              Guo, Zifan Carl,                              Kheirkhah, Tara Rezaei,                              Vukelić, Mateja,                              Tegmark, Max                              
Published in Entropy (Basel, Switzerland) (02.12.2024)
                   
      
      
                                                  Published in Entropy (Basel, Switzerland) (02.12.2024)
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          Performance evaluation of polygon-based holograms in terms of software, hardware and algorithms
                                      
                                            Gupta, Anuj,                              Wang, Fan,                              Das, Bhargab,                              Kumar, Raj,                              Blinder, David,                              Ito, Tomoyoshi,                              Shimobaba, Tomoyoshi                              
Published in Optics communications (15.12.2024)
                   
      
      
                                                  Published in Optics communications (15.12.2024)
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          Code-free cloud computing service to facilitate rapid biomedical digital signal processing and algorithm development
                                      
                                            Jennings, Michael R.,                              Turner, Colin,                              Bond, Raymond R.,                              Kennedy, Alan,                              Thantilage, Ranul,                              Kechadi, Mohand Tahar,                              Le-Khac, Nhien-An,                              McLaughlin, James,                              Finlay, Dewar D.                              
Published in Computer methods and programs in biomedicine (01.11.2021)
                   
      
      
                                                  Published in Computer methods and programs in biomedicine (01.11.2021)
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