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    Increasing tendency of urine protein is a risk factor for rapid eGFR decline in patients with CKD: A machine learning-based prediction model by using a big database
                                      
                                            Inaguma, Daijo,                              Kitagawa, Akimitsu,                              Yanagiya, Ryosuke,                              Koseki, Akira,                              Iwamori, Toshiya,                              Kudo, Michiharu,                              Yuzawa, Yukio                              
Published in PLoS ONE (17.09.2020)
                   
      
      
                                                  Published in PLoS ONE (17.09.2020)
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          PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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          Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
                                      
                                            Peng, Yun,                              Gao, Shuzheng,                              Gao, Cuiyun,                              Huo, Yintong,                              Lyu, Michael R.                              
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
                   
      
      
                                                  Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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          scTPC: a novel semisupervised deep clustering model for scRNA-seq data
                                      
                                            Qiu, Yushan,                              Yang, Lingfei,                              Jiang, Hao,                              Zou, Quan                              
Published in Bioinformatics (Oxford, England) (02.05.2024)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (02.05.2024)
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          pyNBS: a Python implementation for network-based stratification of tumor mutations
                                      
                                            Huang, Justin K,                              Jia, Tongqiu,                              Carlin, Daniel E,                              Ideker, Trey                              
Published in Bioinformatics (15.08.2018)
                   
      
      
                                                  Published in Bioinformatics (15.08.2018)
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          Comparative Analysis of AI Models for Python Code Generation: A HumanEval Benchmark Study
                                      
                                            Bayram, Ali,                              Menekse Dalveren, Gonca Gokce,                              Derawi, Mohammad                              
Published in Applied sciences (10.09.2025)
                   
      
      
                                                  Published in Applied sciences (10.09.2025)
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          COBRApy: COnstraints-Based Reconstruction and Analysis for Python
                                      
                                            Ebrahim, Ali,                              Lerman, Joshua A,                              Palsson, Bernhard O,                              Hyduke, Daniel R                              
Published in BMC systems biology (08.08.2013)
                   
      
      
                                                  Published in BMC systems biology (08.08.2013)
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          Correct orchestration of federated learning generic algorithms: Python translation to CSP and verification by PAT
                                      
                                            Djukic, Miodrag,                              Prokić, Ivan,                              Popovic, Miroslav,                              Ghilezan, Silvia,                              Popovic, Marko,                              Prokić, Simona                              
Published in International journal on software tools for technology transfer (01.02.2025)
                   
      
      
                                                  Published in International journal on software tools for technology transfer (01.02.2025)
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          Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison
                                      
                                            Kuijpers, Lucas,                              Hornung, Bastian,                              van den Hout - van Vroonhoven, Mirjam C. G. N.,                              van IJcken, Wilfred F. J.,                              Grosveld, Frank,                              Mulugeta, Eskeatnaf                              
Published in BMC genomics (12.04.2024)
                   
      
      
                                                  Published in BMC genomics (12.04.2024)
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          Towards robust algorithms for current deposition and dynamic load-balancing in a GPU particle in cell code
                          
                               
                                                Published in                                                AIP conference proceedings
             (01.01.2012)                                            
                   
      
      
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          Comparison of Image-Based and Text-Based Source Code Classification Using Deep Learning
                                      
                                            Kiyak, Elife Ozturk,                              Cengiz, Ayse Betul,                              Birant, Kokten Ulas,                              Birant, Derya                              
Published in SN computer science (01.09.2020)
                   
      
      
                                                  Published in SN computer science (01.09.2020)
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