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    Comparative Analysis of AI Models for Python Code Generation: A HumanEval Benchmark Study
                                      
                                            Bayram, Ali,                              Menekse Dalveren, Gonca Gokce,                              Derawi, Mohammad                              
Published in Applied sciences (10.09.2025)
                   
      
      
                                                  Published in Applied sciences (10.09.2025)
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          SciPy 1.0: fundamental algorithms for scientific computing in Python
                                      
                                            Virtanen, Pauli,                              Gommers, Ralf,                              Oliphant, Travis E.,                              Haberland, Matt,                              Reddy, Tyler,                              Cournapeau, David,                              Burovski, Evgeni,                              Peterson, Pearu,                              Weckesser, Warren,                              Bright, Jonathan,                              van der Walt, Stéfan J.,                              Brett, Matthew,                              Wilson, Joshua,                              Millman, K. Jarrod,                              Mayorov, Nikolay,                              Nelson, Andrew R. J.,                              Jones, Eric,                              Kern, Robert,                              Larson, Eric,                              Carey, C J,                              Polat, İlhan,                              Feng, Yu,                              Moore, Eric W.,                              VanderPlas, Jake,                              Laxalde, Denis,                              Perktold, Josef,                              Cimrman, Robert,                              Henriksen, Ian,                              Quintero, E. A.,                              Harris, Charles R.,                              Archibald, Anne M.,                              Ribeiro, Antônio H.,                              Pedregosa, Fabian,                              van Mulbregt, Paul                              
Published in Nature methods (01.03.2020)
                   
      
      
                                                  Published in Nature methods (01.03.2020)
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          Core Signaling Pathways in Human Pancreatic Cancers Revealed by Global Genomic Analyses
                                      
                                            Jones, Siân,                              Zhang, Xiaosong,                              Parsons, D. Williams,                              Lin, Jimmy Cheng-Ho,                              Leary, Rebecca J,                              Angenendt, Philipp,                              Mankoo, Parminder,                              Carter, Hannah,                              Kamiyama, Hirohiko,                              Jimeno, Antonio,                              Hong, Seung-Mo,                              Fu, Baojin,                              Lin, Ming-Tseh,                              Calhoun, Eric S,                              Kamiyama, Mihoko,                              Walter, Kimberly,                              Nikolskaya, Tatiana,                              Nikolsky, Yuri,                              Hartigan, James,                              Smith, Douglas R,                              Hidalgo, Manuel,                              Leach, Steven D,                              Klein, Alison P,                              Jaffee, Elizabeth M,                              Goggins, Michael,                              Maitra, Anirban,                              Iacobuzio-Donahue, Christine,                              Eshleman, James R,                              Kern, Scott E,                              Hruban, Ralph H,                              Karchin, Rachel,                              Papadopoulos, Nickolas,                              Parmigiani, Giovanni,                              Vogelstein, Bert,                              Velculescu, Victor E,                              Kinzler, Kenneth W                              
Published in Science (American Association for the Advancement of Science) (26.09.2008)
                   
      
      
                                                  Published in Science (American Association for the Advancement of Science) (26.09.2008)
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          pyOpenMS: A Python-based interface to the OpenMS mass-spectrometry algorithm library
                                      
                                            Röst, Hannes L.,                              Schmitt, Uwe,                              Aebersold, Ruedi,                              Malmström, Lars                              
Published in Proteomics (Weinheim) (01.01.2014)
                   
      
      
                                                  Published in Proteomics (Weinheim) (01.01.2014)
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          Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
                                      
                                            Peng, Yun,                              Gao, Shuzheng,                              Gao, Cuiyun,                              Huo, Yintong,                              Lyu, Michael R.                              
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
                   
      
      
                                                  Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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              Conference Proceeding
          
              
          Robust high-contrast companion detection from interferometric observations: The CANDID algorithm and an application to six binary Cepheids
                                      
                                            Gallenne, A.,                              Mérand, A.,                              Kervella, P.,                              Monnier, J. D.,                              Schaefer, G. H.,                              Baron, F.,                              Breitfelder, J.,                              Le Bouquin, J. B.,                              Roettenbacher, R. M.,                              Gieren, W.,                              Pietrzyński, G.,                              McAlister, H.,                              ten Brummelaar, T.,                              Sturmann, J.,                              Sturmann, L.,                              Turner, N.,                              Ridgway, S.,                              Kraus, S.                              
Published in Astronomy and astrophysics (Berlin) (01.07.2015)
                   
      
      
                                                  Published in Astronomy and astrophysics (Berlin) (01.07.2015)
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          GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
                                      
                                            Fang, Zhuoqing,                              Liu, Xinyuan,                              Peltz, Gary                              
Published in Bioinformatics (Oxford, England) (01.01.2023)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (01.01.2023)
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          MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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          PyLog: An Algorithm-Centric Python-Based FPGA Programming and Synthesis Flow
                                      
                                            Huang, Sitao,                              Wu, Kun,                              Jeong, Hyunmin,                              Wang, Chengyue,                              Chen, Deming,                              Hwu, Wen-Mei                              
Published in IEEE transactions on computers (01.12.2021)
                   
      
      
                                                  Published in IEEE transactions on computers (01.12.2021)
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          CoastSat: A Google Earth Engine-enabled Python toolkit to extract shorelines from publicly available satellite imagery
                                      
                                            Vos, Kilian,                              Splinter, Kristen D.,                              Harley, Mitchell D.,                              Simmons, Joshua A.,                              Turner, Ian L.                              
Published in Environmental modelling & software : with environment data news (01.12.2019)
                   
      
      
                                                  Published in Environmental modelling & software : with environment data news (01.12.2019)
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          ImputAccur: fast and user-friendly calculation of genotype-imputation accuracy-measures
                                      
                                            Thormann, Kolja A.,                              Tozzi, Viola,                              Starke, Paula,                              Bickeböller, Heike,                              Baum, Marcus,                              Rosenberger, Albert                              
Published in BMC bioinformatics (04.08.2022)
                   
      
      
                                                  Published in BMC bioinformatics (04.08.2022)
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          PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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          PHOTONAI—A Python API for rapid machine learning model development
                                      
                                            Leenings, Ramona,                              Winter, Nils Ralf,                              Plagwitz, Lucas,                              Holstein, Vincent,                              Ernsting, Jan,                              Sarink, Kelvin,                              Fisch, Lukas,                              Steenweg, Jakob,                              Kleine-Vennekate, Leon,                              Gebker, Julian,                              Emden, Daniel,                              Grotegerd, Dominik,                              Opel, Nils,                              Risse, Benjamin,                              Jiang, Xiaoyi,                              Dannlowski, Udo,                              Hahn, Tim                              
Published in PloS one (21.07.2021)
                   
      
      
                                                  Published in PloS one (21.07.2021)
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          Conflict-aware Inference of Python Compatible Runtime Environments with Domain Knowledge Graph
                                      
                                            Cheng, Wei,                              Zhu, Xiangrong,                              Hu, Wei                              
Published in 2022 IEEE/ACM 44th International Conference on Software Engineering (ICSE) (01.05.2022)
                   
      
      
                                                  Published in 2022 IEEE/ACM 44th International Conference on Software Engineering (ICSE) (01.05.2022)
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              Conference Proceeding
          
              
          Efficient single-scattering lookup table for lidar and polarimeter phytoplankton studies
                                      
                                            Chemyakin, Eduard,                              Stamnes, Snorre,                              Allen, James,                              Burton, Sharon P,                              Hair, Johnathan,                              Hostetler, Chris,                              Chowdhary, Jacek,                              van Diedenhoven, Bastiaan,                              Cairns, Brian                              
Published in Optics letters (01.05.2024)
                   
      
      
                                                  Published in Optics letters (01.05.2024)
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