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PyLog: An Algorithm-Centric Python-Based FPGA Programming and Synthesis Flow
Huang, Sitao, Wu, Kun, Jeong, Hyunmin, Wang, Chengyue, Chen, Deming, Hwu, Wen-Mei
Published in IEEE transactions on computers (01.12.2021)
Published in IEEE transactions on computers (01.12.2021)
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Journal Article
PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
Singh, Gursimran, Chharia, Aviral, Upadhyay, Rahul, Kumar, Vinay, Longo, Luca
Published in PloS one (06.08.2025)
Published in PloS one (06.08.2025)
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Journal Article
PODPAC: open-source Python software for enabling harmonized, plug-and-play processing of disparate earth observation data sets and seamless transition onto the serverless cloud by earth scientists
Ueckermann, Mattheus P., Bieszczad, Jerry, Entekhabi, Dara, Shapiro, Marc L., Callendar, David R., Sullivan, David, Milloy, Jeffrey
Published in Earth science informatics (01.12.2020)
Published in Earth science informatics (01.12.2020)
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Journal Article
ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data
Kieser, Silas, Brown, Joseph, Zdobnov, Evgeny M., Trajkovski, Mirko, McCue, Lee Ann
Published in BMC bioinformatics (22.06.2020)
Published in BMC bioinformatics (22.06.2020)
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Journal Article
MXene/WO 3 Sensor Array with Improved SNN Algorithm for Accurate Identification of Toxic Gases
Guo, Liangchao, Wang, Junke, Han, Haoran, Wang, Peng, Lu, Yunxiang, Yuan, Qilong, Du, Chunyu, Yin, Shuo, Zhou, Ye, Zhang, Chao
Published in ACS applied materials & interfaces (13.11.2024)
Published in ACS applied materials & interfaces (13.11.2024)
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Journal Article
Bioinformatic pipelines in Python with Leaf
Napolitano, Francesco, Mariani-Costantini, Renato, Tagliaferri, Roberto
Published in BMC bioinformatics (21.06.2013)
Published in BMC bioinformatics (21.06.2013)
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Journal Article
ArcOLITIRS: A Toolbox for Radiometric Calibration and Surface Temperature Estimation from Landsat 8 Products in ArcGIS Environment
Arunachalam, M., Joshua, R. Melwyn, Kochuparampil, Ajith Joseph, Saravanavel, J.
Published in Journal of the Indian Society of Remote Sensing (01.03.2023)
Published in Journal of the Indian Society of Remote Sensing (01.03.2023)
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Journal Article
SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)
Published in Nature methods (01.03.2020)
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Journal Article
pyOpenMS: A Python-based interface to the OpenMS mass-spectrometry algorithm library
Röst, Hannes L., Schmitt, Uwe, Aebersold, Ruedi, Malmström, Lars
Published in Proteomics (Weinheim) (01.01.2014)
Published in Proteomics (Weinheim) (01.01.2014)
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Journal Article
PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data
Hu, Xiaojun, Hurtado-Gonzales, Oscar P., Adhikari, Bishwo N., French-Monar, Ronald D., Malapi, Martha, Foster, Joseph A., McFarland, Clint D.
Published in BMC bioinformatics (13.12.2023)
Published in BMC bioinformatics (13.12.2023)
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Journal Article
Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
Peng, Yun, Gao, Shuzheng, Gao, Cuiyun, Huo, Yintong, Lyu, Michael R.
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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Conference Proceeding
GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
Fang, Zhuoqing, Liu, Xinyuan, Peltz, Gary
Published in Bioinformatics (Oxford, England) (01.01.2023)
Published in Bioinformatics (Oxford, England) (01.01.2023)
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Journal Article