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SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)
Published in Nature methods (01.03.2020)
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Journal Article
Core Imaging Library - Part I: a versatile Python framework for tomographic imaging
Jørgensen, J. S., Ametova, E., Burca, G., Fardell, G., Papoutsellis, E., Pasca, E., Thielemans, K., Turner, M., Warr, R., Lionheart, W. R. B., Withers, P. J.
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (23.08.2021)
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (23.08.2021)
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Journal Article
Reproducible image-based profiling with Pycytominer
Serrano, Erik, Chandrasekaran, Srinivas Niranj, Bunten, Dave, Brewer, Kenneth I., Tomkinson, Jenna, Kern, Roshan, Bornholdt, Michael, Fleming, Stephen J., Pei, Ruifan, Arevalo, John, Tsang, Hillary, Rubinetti, Vincent, Tromans-Coia, Callum, Becker, Tim, Weisbart, Erin, Bunne, Charlotte, Kalinin, Alexandr A., Senft, Rebecca, Taylor, Stephen J., Jamali, Nasim, Adeboye, Adeniyi, Abbasi, Hamdah Shafqat, Goodman, Allen, Caicedo, Juan C., Carpenter, Anne E., Cimini, Beth A., Singh, Shantanu, Way, Gregory P.
Published in Nature methods (01.04.2025)
Published in Nature methods (01.04.2025)
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Journal Article
Screening for Parkinson’s disease using “computer vision”
Kasemsap, Narongrit, Tikkapanyo, Purinat, Wanjantuk, Panupong, Vorasoot, Nisa, Kongbunkiat, Kannikar, Panitchote, Anupol
Published in PloS one (12.08.2025)
Published in PloS one (12.08.2025)
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Journal Article
VMseg: Using spatial variance to automatically segment retinal non-perfusion on OCT-angiography
LE BOITE, Hugo, COUTURIER, Aude, TADAYONI, Ramin, LAMARD, Mathieu, QUELLEC, Gwenolé
Published in PloS one (07.08.2024)
Published in PloS one (07.08.2024)
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Journal Article
Enhancing surface quality of metal parts manufactured via LPBF: ANN classifier and bayesian learning approach
Arunadevi, M., Veeresha, G., Kharche, Anil W., Suryawanshi, Vinayak P., Sollapur, Shrishail B., Mhatre, Mitali S., Kapadani, Kaustubh R., Nalawade, Dattatraya
Published in International journal on interactive design and manufacturing (01.08.2024)
Published in International journal on interactive design and manufacturing (01.08.2024)
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Journal Article
QFlow lite dataset: A machine-learning approach to the charge states in quantum dot experiments
Zwolak, Justyna P., Kalantre, Sandesh S., Wu, Xingyao, Ragole, Stephen, Taylor, Jacob M.
Published in PloS one (17.10.2018)
Published in PloS one (17.10.2018)
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Journal Article
Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC
Padovani, Francesco, Mairhörmann, Benedikt, Falter-Braun, Pascal, Lengefeld, Jette, Schmoller, Kurt M.
Published in BMC biology (05.08.2022)
Published in BMC biology (05.08.2022)
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Journal Article
Nonparametric IPSS: fast, flexible feature selection with false discovery control
Melikechi, Omar, Dunson, David B, Miller, Jeffrey W
Published in Bioinformatics (Oxford, England) (13.05.2025)
Published in Bioinformatics (Oxford, England) (13.05.2025)
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Journal Article
A Filtering Method to Generate High Quality Short Reads Using Illumina Paired-End Technology
Eren, A. Murat, Vineis, Joseph H., Morrison, Hilary G., Sogin, Mitchell L.
Published in PloS one (17.06.2013)
Published in PloS one (17.06.2013)
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Journal Article