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    PyImageJ: A library for integrating ImageJ and Python
                                      
                                            Rueden, Curtis T.,                              Hiner, Mark C.,                              Evans, Edward L.,                              Pinkert, Michael A.,                              Lucas, Alice M.,                              Carpenter, Anne E.,                              Cimini, Beth A.,                              Eliceiri, Kevin W.                              
Published in Nature methods (01.11.2022)
                   
      
      
                                                  Published in Nature methods (01.11.2022)
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          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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          VMseg: Using spatial variance to automatically segment retinal non-perfusion on OCT-angiography
                                      
                                            LE BOITE, Hugo,                              COUTURIER, Aude,                              TADAYONI, Ramin,                              LAMARD, Mathieu,                              QUELLEC, Gwenolé                              
Published in PloS one (07.08.2024)
                   
      
      
                                                  Published in PloS one (07.08.2024)
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          GLAMbox: A Python toolbox for investigating the association between gaze allocation and decision behaviour
                                      
                                            Molter, Felix,                              Thomas, Armin W,                              Heekeren, Hauke R,                              Mohr, Peter N. C                              
Published in PloS one (16.12.2019)
                   
      
      
                                                  Published in PloS one (16.12.2019)
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          Diffusional Kurtosis Imaging in the Diffusion Imaging in Python Project
                                      
                                            Henriques, Rafael Neto,                              Correia, Marta M.,                              Marrale, Maurizio,                              Huber, Elizabeth,                              Kruper, John,                              Koudoro, Serge,                              Yeatman, Jason D.,                              Garyfallidis, Eleftherios,                              Rokem, Ariel                              
Published in Frontiers in human neuroscience (19.07.2021)
                   
      
      
                                                  Published in Frontiers in human neuroscience (19.07.2021)
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          QuOCS: The quantum optimal control suite
                                      
                                            Rossignolo, Marco,                              Reisser, Thomas,                              Marshall, Alastair,                              Rembold, Phila,                              Pagano, Alice,                              Vetter, Philipp J.,                              Said, Ressa S.,                              Müller, Matthias M.,                              Motzoi, Felix,                              Calarco, Tommaso,                              Jelezko, Fedor,                              Montangero, Simone                              
Published in Computer physics communications (01.10.2023)
                   
      
      
                                                  Published in Computer physics communications (01.10.2023)
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          Prediction of stunting and its socioeconomic determinants among adolescent girls in Ethiopia using machine learning algorithms
                                      
                                            Zemariam, Alemu Birara,                              Abate, Biruk Beletew,                              Alamaw, Addis Wondmagegn,                              Lake, Eyob shitie,                              Yilak, Gizachew,                              Ayele, Mulat,                              Tilahun, Befkad Derese,                              Ngusie, Habtamu Setegn                              
Published in PloS one (24.01.2025)
                   
      
      
                                                  Published in PloS one (24.01.2025)
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          frvcpy: An Open-Source Solver for the Fixed Route Vehicle Charging Problem
                                      
                                            Kullman, Nicholas D.,                              Froger, Aurelien,                              Mendoza, Jorge E.,                              Goodson, Justin C.                              
Published in INFORMS journal on computing (01.10.2021)
                   
      
      
                                                  Published in INFORMS journal on computing (01.10.2021)
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          Screening for Parkinson’s disease using “computer vision”
                                      
                                            Kasemsap, Narongrit,                              Tikkapanyo, Purinat,                              Wanjantuk, Panupong,                              Vorasoot, Nisa,                              Kongbunkiat, Kannikar,                              Panitchote, Anupol                              
Published in PloS one (12.08.2025)
                   
      
      
                                                  Published in PloS one (12.08.2025)
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          Natural language processing augments comorbidity documentation in neurosurgical inpatient admissions
                                      
                                            Sastry, Rahul A.,                              Setty, Aayush,                              Liu, David D.,                              Zheng, Bryan,                              Ali, Rohaid,                              Weil, Robert J.,                              Roye, G. Dean,                              Doberstein, Curtis E.,                              Oyelese, Adetokunbo A.,                              Niu, Tianyi,                              Gokaslan, Ziya L.,                              Telfeian, Albert E.                              
Published in PloS one (09.05.2024)
                   
      
      
                                                  Published in PloS one (09.05.2024)
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          FORCETRACKER: A versatile tool for standardized assessment of tissue contractile properties in 3D Heart-on-Chip platforms
                                      
                                            Rivera-Arbeláez, José M,                              Dostanić, Milica,                              Windt, Laura M,                              Stein, Jeroen M,                              Cofiño-Fabres, Carla,                              Boonen, Tom,                              Wiendels, Maury,                              van den Berg, Albert,                              Segerink, Loes I,                              Mummery, Christine L,                              Sarro, Pasqualina M,                              van Meer, Berend J,                              Ribeiro, Marcelo C,                              Mastrangeli, Massimo,                              Passier, Robert                              
Published in PloS one (13.02.2025)
                   
      
      
                                                  Published in PloS one (13.02.2025)
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          Predictive value of machine learning-based T2-weighted MRI radiomics in the diagnosis of polycystic ovary syndrome
                                      
                                            Rona, Gunay,                              Fistikcioglu, Neriman,                              Serel, Tekin Ahmet,                              Arifoglu, Meral,                              Eser, Mehmet Bilgin,                              Ozcelik, Serhat,                              Aydin, Kadriye                              
Published in Northern Clinics of Istanbul (01.01.2025)
                   
      
      
                                                  Published in Northern Clinics of Istanbul (01.01.2025)
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