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SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)
Published in Nature methods (01.03.2020)
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Journal Article
A Comparative Assessment of the Performance of Individual Tree Crowns Delineation Algorithms from ALS Data in Tropical Forests
Aubry-Kientz, Mélaine, Dutrieux, Raphaël, Ferraz, Antonio, Saatchi, Sassan, Hamraz, Hamid, Williams, Jonathan, Coomes, David, Piboule, Alexandre, Vincent, Grégoire
Published in Remote sensing (Basel, Switzerland) (01.05.2019)
Published in Remote sensing (Basel, Switzerland) (01.05.2019)
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Journal Article
A new radar waveform design algorithm with improved feasibility for spectral coexistence
Aubry, A., De Maio, A., Huang, Y., Piezzo, M., Farina, A.
Published in IEEE transactions on aerospace and electronic systems (01.04.2015)
Published in IEEE transactions on aerospace and electronic systems (01.04.2015)
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Journal Article
CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure
Varabyou, Ales, Sommer, Markus J., Erdogdu, Beril, Shinder, Ida, Minkin, Ilia, Chao, Kuan-Hao, Park, Sukhwan, Heinz, Jakob, Pockrandt, Christopher, Shumate, Alaina, Rincon, Natalia, Puiu, Daniela, Steinegger, Martin, Salzberg, Steven L., Pertea, Mihaela
Published in Genome Biology (30.10.2023)
Published in Genome Biology (30.10.2023)
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Journal Article
MetPy: A Meteorological Python Library for Data Analysis and Visualization
May, Ryan M., Goebbert, Kevin H., Thielen, Jonathan E., Leeman, John R., Camron, M. Drew, Bruick, Zachary, Bruning, Eric C., Manser, Russell P., Arms, Sean C., Marsh, Patrick T.
Published in Bulletin of the American Meteorological Society (01.10.2022)
Published in Bulletin of the American Meteorological Society (01.10.2022)
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Journal Article
Parallel distributed computing using Python
Dalcin, Lisandro D., Paz, Rodrigo R., Kler, Pablo A., Cosimo, Alejandro
Published in Advances in water resources (01.09.2011)
Published in Advances in water resources (01.09.2011)
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Journal Article
Yet another hexahedral dominant meshing algorithm: HexDom
Karamete, B. Kaan, Aubry, Romain, Mestreau, Eric L., Dey, Saikat
Published in Finite elements in analysis and design (15.11.2017)
Published in Finite elements in analysis and design (15.11.2017)
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Journal Article
Core Imaging Library - Part I: a versatile Python framework for tomographic imaging
Jørgensen, J. S., Ametova, E., Burca, G., Fardell, G., Papoutsellis, E., Pasca, E., Thielemans, K., Turner, M., Warr, R., Lionheart, W. R. B., Withers, P. J.
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (23.08.2021)
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (23.08.2021)
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Journal Article
AnalyZr: A Python application for zircon grain image segmentation and shape analysis
Scharf, T., Kirkland, C.L., Daggitt, M.L., Barham, M., Puzyrev, V.
Published in Computers & geosciences (01.05.2022)
Published in Computers & geosciences (01.05.2022)
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Journal Article
Author Correction: SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)
Published in Nature methods (01.03.2020)
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Journal Article
Python workflow for the selection and identification of marker peptides—proof-of-principle study with heated milk
Kuhnen, Gesine, Class, Lisa-Carina, Badekow, Svenja, Hanisch, Kim Lara, Rohn, Sascha, Kuballa, Jürgen
Published in Analytical and bioanalytical chemistry (01.06.2024)
Published in Analytical and bioanalytical chemistry (01.06.2024)
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Journal Article
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article