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Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS

by Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)

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MXene/WO 3 Sensor Array with Improved SNN Algorithm for Accurate Identification of Toxic Gases

by Guo, Liangchao, Wang, Junke, Han, Haoran, Wang, Peng, Lu, Yunxiang, Yuan, Qilong, Du, Chunyu, Yin, Shuo, Zhou, Ye, Zhang, Chao
Published in ACS applied materials & interfaces (13.11.2024)

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A multiple-image encryption algorithm based on orthogonal arrays with strength 3

by Xu, Ming
Published in Optics and laser technology (01.12.2023)

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PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data

by Georgi, Benjamin, Costa, Ivan Gesteira, Schliep, Alexander
Published in BMC bioinformatics (06.01.2010)

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Python for chemistry : an introduction to python algorithms, simulations, and programing for chemistry

by Kanagasabapathy, M.
Year of Publication 2023

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Design and implementation of a multibeam filtering antenna array using compact 3 × 3 Nolen matrix aided by grey wolf algorithm

by Liu, Haiwen, Gu, Xinyi, Gao, Mengying, Song, Zeren, Tian, Hongliang
Published in International journal of electronics and communications (01.09.2024)

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Uncovering structural ensembles from single-particle cryo-EM data using cryoDRGN

by Kinman, Laurel F., Powell, Barrett M., Zhong, Ellen D., Berger, Bonnie, Davis, Joseph H.
Published in Nature protocols (01.02.2023)

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Sb[sub.2]S[sub.3]-Based Dynamically Tuned Color Filter Array via Genetic Algorithm

by Wei, Xueling, Nong, Jie, Zhang, Yiyi, Ma, Hansi, Huang, Rixing, Yuan, Zhenkun, Zhang, Zhenfu, Zhang, Zhenrong, Yang, Junbo
Published in Nanomaterials (Basel, Switzerland) (01.04.2023)

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Sb 2 S 3 -Based Dynamically Tuned Color Filter Array via Genetic Algorithm

by Wei, Xueling, Nong, Jie, Zhang, Yiyi, Ma, Hansi, Huang, Rixing, Yuan, Zhenkun, Zhang, Zhenfu, Zhang, Zhenrong, Yang, Junbo
Published in Nanomaterials (Basel, Switzerland) (24.04.2023)

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Toward a unified framework for interpreting machine-learning models in neuroimaging

by Kohoutová, Lada, Heo, Juyeon, Cha, Sungmin, Lee, Sungwoo, Moon, Taesup, Wager, Tor D., Woo, Choong-Wan
Published in Nature protocols (01.04.2020)

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Robustness D 3 LS beamforming algorithm against the uncertainties in a uniform linear array radar of dipole antenna

by Zarezadeh, Esmail, Ghorbani, Ayaz
Published in International journal of communication systems (10.03.2021)

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Interest objects detection for self-driving cars using a Deep learning approach

by Awandu, Chibundu, Lamichhane, Santosh, Tyson, Shaquan, Kalenga, Aldridge, Mwase, Buchizya, Brown, Tianna, Calderon, Juan
Published in Florida scientist (01.09.2024)

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Design of Heuristic Algorithms for Hard Optimization: With Python Codes for the Travelling Salesman Problem

by Taillard, Eric D
Year of Publication 2023

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eBook Publication

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PyImageJ: A library for integrating ImageJ and Python

by Rueden, Curtis T., Hiner, Mark C., Evans, Edward L., Pinkert, Michael A., Lucas, Alice M., Carpenter, Anne E., Cimini, Beth A., Eliceiri, Kevin W.
Published in Nature methods (01.11.2022)

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Differentiation of Bone Metastasis in Elderly Patients With Lung Adenocarcinoma Using Multiple Machine Learning Algorithms

by Zhou, Cheng-Mao, Wang, Ying, Xue, Qiong, Zhu, Yu
Published in Cancer control (01.01.2023)

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QFlow lite dataset: A machine-learning approach to the charge states in quantum dot experiments

by Zwolak, Justyna P., Kalantre, Sandesh S., Wu, Xingyao, Ragole, Stephen, Taylor, Jacob M.
Published in PloS one (17.10.2018)

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ITEP: An integrated toolkit for exploration of microbial pan-genomes

by Benedict, Matthew N, Henriksen, James R, Metcalf, William W, Whitaker, Rachel J, Price, Nathan D
Published in BMC genomics (03.01.2014)

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MEG and EEG data analysis with MNE-Python

by Gramfort, Alexandre
Published in Frontiers in neuroscience (26.12.2013)

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Optimization of water distribution network by genetic algorithm with EPANET-Python Toolkit: ptimization of water distribution network

by Pavansimha, M N, Yusuf Javeed
Published in Journal of earth system science (06.10.2025)

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Python tools for structural tasks in chemistry

by Ryzhkov, Fedor V., Ryzhkova, Yuliya E., Elinson, Michail N.
Published in Molecular diversity (01.08.2025)

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