Vyzkoušejte nový nástroj s podporou AI
  
        
        Summon Research Assistant
        BETA
      
                    
  
      
    Proposing a novel community detection approach to identify cointeracting genomic regions
                                      
                                            Hosseinpoor, Mohammadjavad,                              Parvin, Hamid,                              Nejatian, Samad,                              Rezaie, Vahideh,                              Bagherifard, Karamollah,                              Dehzangi, Abdollah,                              Beheshti, Amin,                              Alinejad-Rokny, Hamid                              
Published in Mathematical biosciences and engineering : MBE (01.01.2020)
                   
      
      
                                                  Published in Mathematical biosciences and engineering : MBE (01.01.2020)
Get full text
              Journal Article
          
              
          Graph embedding and unsupervised learning predict genomic sub-compartments from HiC chromatin interaction data
                                      
                                            Ashoor, Haitham,                              Chen, Xiaowen,                              Rosikiewicz, Wojciech,                              Wang, Jiahui,                              Cheng, Albert,                              Wang, Ping,                              Ruan, Yijun,                              Li, Sheng                              
Published in Nature communications (03.03.2020)
                   
      
      
                                                  Published in Nature communications (03.03.2020)
Get full text
              Journal Article
          
              
          EDG-PPIS: an equivariant and dual-scale graph network for protein–protein interaction site prediction
                                      
                                            Zhang, Zhixin,                              Li, Zhen,                              Li, Wenshuo,                              Zhang, Qunhao,                              Xiao, Jun,                              Ding, Shanyang,                              Han, Yi                              
Published in BMC genomics (29.09.2025)
                   
      
      
                                                  Published in BMC genomics (29.09.2025)
Get full text
              Journal Article
          
              
          A deep learning model for plant lncRNA-protein interaction prediction with graph attention
                                      
                                            Wekesa, Jael Sanyanda,                              Meng, Jun,                              Luan, Yushi                              
Published in Molecular genetics and genomics : MGG (01.09.2020)
                   
      
      
                                                  Published in Molecular genetics and genomics : MGG (01.09.2020)
Get full text
              Journal Article
          
              
          Chromatin interaction–aware gene regulatory modeling with graph attention networks
                                      
                                            Karbalayghareh, Alireza,                              Sahin, Merve,                              Leslie, Christina S.                              
Published in Genome research (01.05.2022)
                   
      
      
                                                  Published in Genome research (01.05.2022)
Get full text
              Journal Article
          
              
          GENOMIC PREDICTION METHOD AND APPARATUS BASED ON GENOTYPE-ENVIRONMENT INTERACTION HETEROGENEOUS GRAPH
                                      
                                            WANG, Kaiyi,                              LI, Jinlong,                              ZHANG, Dongfeng,                              PAN, Shouhui,                              HAN, Yanyun,                              LIU, Zhongqiang,                              YANG, Feng                              
Year of Publication 30.07.2025
                         
                                            
                   
      
      
                                                                                
                                                        Get full text
                                        
              Year of Publication 30.07.2025
              Patent
          
              
          Novel link prediction for large-scale miRNA-lncRNA interaction network in a bipartite graph
                                      
                                            Huang, Zhi-An,                              Huang, Yu-An,                              You, Zhu-Hong,                              Zhu, Zexuan,                              Sun, Yiwen                              
Published in BMC medical genomics (31.12.2018)
                   
      
      
                                                  Published in BMC medical genomics (31.12.2018)
Get full text
              Journal Article
          
              
          Identifying compound-protein interactions with knowledge graph embedding of perturbation transcriptomics
                                      
                                            Ni, Shengkun,                              Kong, Xiangtai,                              Zhang, Yingying,                              Chen, Zhengyang,                              Wang, Zhaokun,                              Fu, Zunyun,                              Huo, Ruifeng,                              Tong, Xiaochu,                              Qu, Ning,                              Wu, Xiaolong,                              Wang, Kun,                              Zhang, Wei,                              Zhang, Runze,                              Zhang, Zimei,                              Shi, Jiangshan,                              Wang, Yitian,                              Yang, Ruirui,                              Li, Xutong,                              Zhang, Sulin,                              Zheng, Mingyue                              
Published in Cell genomics (09.10.2024)
                   
      
      
                                                  Published in Cell genomics (09.10.2024)
Get full text
              Journal Article
          
              
          PyMINEr Finds Gene and Autocrine-Paracrine Networks from Human Islet scRNA-Seq
                                      
                                            Tyler, Scott R.,                              Rotti, Pavana G.,                              Sun, Xingshen,                              Yi, Yaling,                              Xie, Weiliang,                              Winter, Michael C.,                              Flamme-Wiese, Miles J.,                              Tucker, Budd A.,                              Mullins, Robert F.,                              Norris, Andrew W.,                              Engelhardt, John F.                              
Published in Cell reports (Cambridge) (12.02.2019)
                   
      
      
                                                  Published in Cell reports (Cambridge) (12.02.2019)
Get full text
              Journal Article
          
              
          Characterizing the Survival-Associated Interactions between Tumor-infiltrating Lymphocytes and Tumors from Pathological Images and Multi-omics Data
                                      
                                            Shao, Wei,                              Zuo, Yingli,                              Shi, YangYang,                              Wu, Yawen,                              Tang, Jiao,                              Zhao, Junyong,                              Sun, Liang,                              Lu, Zixiao,                              Sheng, Jianpeng,                              Zhu, Qi,                              Zhang, Daoqiang                              
Published in IEEE transactions on medical imaging (01.10.2023)
                   
      
      
                                                  Published in IEEE transactions on medical imaging (01.10.2023)
Get full text
              Journal Article
          
              
          The Immersive Graph Genome Explorer: Navigating Genomics in Immersive Virtual Reality
                                      
                                            Kuznetsov, Maxim,                              Elor, Aviv,                              Kurniawan, Sri,                              Bosworth, Colleen,                              Rosen, Yohei,                              Heyer, Nicholas,                              Teodorescu, Mircea,                              Paten, Benedict,                              Haussler, David                              
Published in SeGAH ... IEEE ... International Conference on Serious Games and Applications for Health (Online) (04.08.2021)
                   
      
      
                                                  Published in SeGAH ... IEEE ... International Conference on Serious Games and Applications for Health (Online) (04.08.2021)
Get full text
              Conference Proceeding
          
              
          Multi-Block Bipartite Graph for Integrative Genomic Analysis
                                      
                                            Mingon Kang,                              Juyoung Park,                              Dong-Chul Kim,                              Biswas, Ashis K.,                              Chunyu Liu,                              Gao, Jean                              
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.11.2017)
                   
      
      
                                                  Published in IEEE/ACM transactions on computational biology and bioinformatics (01.11.2017)
Get full text
              Journal Article
          
              
          Assessing causal relationships in genomics: From Bradford-Hill criteria to complex gene-environment interactions and directed acyclic graphs
                                      
                                            Geneletti, Sara,                              Gallo, Valentina,                              Porta, Miquel,                              Khoury, Muin J,                              Vineis, Paolo                              
Published in Emerging themes in epidemiology (09.06.2011)
                   
      
      
                                                  Published in Emerging themes in epidemiology (09.06.2011)
Get full text
              Journal Article