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Correlation approach to identify coding regions in DNA sequences
Ossadnik, S.M., Buldyrev, S.V., Goldberger, A.L., Havlin, S., Mantegna, R.N., Peng, C.K., Simons, M., Stanley, H.E.
Published in Biophysical journal (01.07.1994)
Published in Biophysical journal (01.07.1994)
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Journal Article
Scaling features of noncoding DNA
Stanley, H.E, Buldyrev, S.V, Goldberger, A.L, Havlin, S, Peng, C.-K, Simons, M
Published in Physica A (1999)
Published in Physica A (1999)
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Journal Article
A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection
Hanada, Kousuke, Zhang, Xu, Borevitz, Justin O., Li, Wen-Hsiung, Shiu, Shin-Han
Published in Genome Research (01.05.2007)
Published in Genome Research (01.05.2007)
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Journal Article
PcircRNA_finder: a software for circRNA prediction in plants
Chen, Li, Yu, Yongyi, Zhang, Xinchen, Liu, Chen, Ye, Chuyu, Fan, Longjiang
Published in Bioinformatics (Oxford, England) (15.11.2016)
Published in Bioinformatics (Oxford, England) (15.11.2016)
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Journal Article
smyRNA: A Novel Ab Initio ncRNA Gene Finder
Salari, Raheleh, Aksay, Cagri, Karakoc, Emre, Unrau, Peter J., Hajirasouliha, Iman, Sahinalp, S. Cenk
Published in PloS one (05.05.2009)
Published in PloS one (05.05.2009)
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Journal Article
Reevaluation of Human Cytomegalovirus Coding Potential
Murphy, Eain, Rigoutsos, Isidore, Shibuya, Tetsuo, Shenk, Thomas E.
Published in Proceedings of the National Academy of Sciences - PNAS (11.11.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (11.11.2003)
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Journal Article
DNA-binding factor footprints and enhancer RNAs identify functional non-coding genetic variants
Biddie, Simon C., Weykopf, Giovanna, Hird, Elizabeth F., Friman, Elias T., Bickmore, Wendy A.
Published in Genome Biology (06.08.2024)
Published in Genome Biology (06.08.2024)
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Journal Article
Gene prediction in metagenomic fragments based on the SVM algorithm
Liu, Yongchu, Guo, Jiangtao, Hu, Gangqing, Zhu, Huaiqiu
Published in BMC bioinformatics (10.04.2013)
Published in BMC bioinformatics (10.04.2013)
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Journal Article
RNA STRUCTURAL SEGMENTATION
DOTÚ, IVAN, LORENZ, WILLIAM A., VAN HENTENRYCK, PASCAL, CLOTE, PETER
Published in Biocomputing 2010 (01.01.2010)
Published in Biocomputing 2010 (01.01.2010)
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Book Chapter
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training
Ter-Hovhannisyan, Vardges, Lomsadze, Alexandre, Chernoff, Yury O., Borodovsky, Mark
Published in Genome Research (01.12.2008)
Published in Genome Research (01.12.2008)
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Journal Article
Searching for Non-coding RNAs in Genomic Sequences Using ncRNAscout
Bao, Michael, Cervantes Cervantes, Miguel, Zhong, Ling, Wang, Jason T.L.
Published in Genomics, proteomics & bioinformatics (01.04.2012)
Published in Genomics, proteomics & bioinformatics (01.04.2012)
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Journal Article
Discovery of Protein Phosphorylation Motifs through Exploratory Data Analysis
Chen, Yi-Cheng, Aguan, Kripamoy, Yang, Chu-Wen, Wang, Yao-Tsung, Pal, Nikhil R., Chung, I-Fang
Published in PloS one (25.05.2011)
Published in PloS one (25.05.2011)
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Journal Article