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Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
Pinto, Dalila, Darvishi, Katayoon, Shi, Xinghua, Rajan, Diana, Rigler, Diane, Fitzgerald, Tom, Lionel, Anath C, Thiruvahindrapuram, Bhooma, MacDonald, Jeffrey R, Mills, Ryan, Prasad, Aparna, Noonan, Kristin, Gribble, Susan, Prigmore, Elena, Donahoe, Patricia K, Smith, Richard S, Park, Ji Hyeon, Hurles, Matthew E, Carter, Nigel P, Lee, Charles, Scherer, Stephen W, Feuk, Lars
Published in Nature biotechnology (01.06.2011)
Published in Nature biotechnology (01.06.2011)
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Journal Article
Multi-qubit entanglement and algorithms on a neutral-atom quantum computer
Graham, T. M., Song, Y., Scott, J., Poole, C., Phuttitarn, L., Jooya, K., Eichler, P., Jiang, X., Marra, A., Grinkemeyer, B., Kwon, M., Ebert, M., Cherek, J., Lichtman, M. T., Gillette, M., Gilbert, J., Bowman, D., Ballance, T., Campbell, C., Dahl, E. D., Crawford, O., Blunt, N. S., Rogers, B., Noel, T., Saffman, M.
Published in Nature (London) (21.04.2022)
Published in Nature (London) (21.04.2022)
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Journal Article
FLOW-MAP: a graph-based, force-directed layout algorithm for trajectory mapping in single-cell time course datasets
Ko, Melissa E., Williams, Corey M., Fread, Kristen I., Goggin, Sarah M., Rustagi, Rohit S., Fragiadakis, Gabriela K., Nolan, Garry P., Zunder, Eli R.
Published in Nature protocols (01.02.2020)
Published in Nature protocols (01.02.2020)
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Journal Article
Value trace problems with assisting references for Python programming self-study
Hay Mar Shwe, San Hay Mar, Funabiki, Nobuo, Syaifudin, Yan Watequlis, Tar, Phyu Phyu, Kyaw, Htoo Htoo Sandi, Thant, Hnin Aye, Kao, Wen-Chung, Min, Nandar Win, Myint, Thandar, Htet, Ei Ei
Published in International journal of Web information systems (06.09.2021)
Published in International journal of Web information systems (06.09.2021)
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Journal Article
A Blank Element Selection Algorithm for Element Fill-in-blank Problems in Client-side Web Programming
Qi, Huiyu, Funabiki, Nobuo, Wai, Khaing Hsu, Hendryanna, Flasma Veronicha, Mon, Khin Thet, Mentari, Mustika, Kao, Wen Chung
Published in Engineering letters (01.03.2024)
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Published in Engineering letters (01.03.2024)
Journal Article
Discovery of common Asian copy number variants using integrated high-resolution array CGH and massively parallel DNA sequencing
Park, Hansoo, Kim, Jong-Il, Ju, Young Seok, Gokcumen, Omer, Mills, Ryan E, Kim, Sheehyun, Lee, Seungbok, Suh, Dongwhan, Hong, Dongwan, Kang, Hyunseok Peter, Yoo, Yun Joo, Shin, Jong-Yeon, Kim, Hyun-Jin, Yavartanoo, Maryam, Chang, Young Wha, Ha, Jung-Sook, Chong, Wilson, Hwang, Ga-Ram, Darvishi, Katayoon, Kim, HyeRan, Yang, Song Ju, Yang, Kap-Seok, Kim, Hyungtae, Hurles, Matthew E, Scherer, Stephen W, Carter, Nigel P, Tyler-Smith, Chris, Lee, Charles, Seo, Jeong-Sun
Published in Nature genetics (01.05.2010)
Published in Nature genetics (01.05.2010)
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Journal Article
A high-performance neural prosthesis enabled by control algorithm design
Gilja, Vikash, Nuyujukian, Paul, Chestek, Cindy A, Cunningham, John P, Yu, Byron M, Fan, Joline M, Churchland, Mark M, Kaufman, Matthew T, Kao, Jonathan C, Ryu, Stephen I, Shenoy, Krishna V
Published in Nature neuroscience (01.12.2012)
Published in Nature neuroscience (01.12.2012)
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Journal Article
Graphic user interface based implementation of longest common subsequence problem in DNA sequencing
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Journal Article
Conference Proceeding
A Meta-Analysis of Retinoblastoma Copy Numbers Refines the List of Possible Driver Genes Involved in Tumor Progression
Kooi, Irsan E., Mol, Berber M., Massink, Maarten P. G., de Jong, Marcus C., de Graaf, Pim, van der Valk, Paul, Meijers-Heijboer, Hanne, Kaspers, Gertjan J. L., Moll, Annette C., te Riele, Hein, Cloos, Jacqueline, Dorsman, Josephine C.
Published in PloS one (26.04.2016)
Published in PloS one (26.04.2016)
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Journal Article
A community effort to assess and improve drug sensitivity prediction algorithms
Costello, James C, Heiser, Laura M, Georgii, Elisabeth, Gönen, Mehmet, Menden, Michael P, Wang, Nicholas J, Bansal, Mukesh, Ammad-ud-din, Muhammad, Hintsanen, Petteri, Khan, Suleiman A, Mpindi, John-Patrick, Kallioniemi, Olli, Honkela, Antti, Aittokallio, Tero, Wennerberg, Krister, Collins, James J, Gallahan, Dan, Singer, Dinah, Saez-Rodriguez, Julio, Kaski, Samuel, Gray, Joe W, Stolovitzky, Gustavo
Published in Nature biotechnology (01.12.2014)
Published in Nature biotechnology (01.12.2014)
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Journal Article
Bacterial genome engineering using CRISPR-associated transposases
Gelsinger, Diego Rivera, Vo, Phuc Leo H., Klompe, Sanne E., Ronda, Carlotta, Wang, Harris H., Sternberg, Samuel H.
Published in Nature protocols (01.03.2024)
Published in Nature protocols (01.03.2024)
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Journal Article
PyComm: Malicious commands detection model for python scripts
Zhou, Anmin, Huang, Tianyi, Huang, Cheng, Li, Dunhan, Song, Chuangchuang
Published in Journal of intelligent & fuzzy systems (01.01.2022)
Published in Journal of intelligent & fuzzy systems (01.01.2022)
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Journal Article
Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus
Bell, Christopher G., Finer, Sarah, Lindgren, Cecilia M., Wilson, Gareth A., Rakyan, Vardhman K., Teschendorff, Andrew E., Akan, Pelin, Stupka, Elia, Down, Thomas A., Prokopenko, Inga, Morison, Ian M., Mill, Jonathan, Pidsley, Ruth, Deloukas, Panos, Frayling, Timothy M., Hattersley, Andrew T., McCarthy, Mark I., Beck, Stephan, Hitman, Graham A.
Published in PloS one (18.11.2010)
Published in PloS one (18.11.2010)
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Journal Article
Design of a Bovine Low-Density SNP Array Optimized for Imputation
Boichard, Didier, Chung, Hoyoung, Dassonneville, Romain, David, Xavier, Eggen, André, Fritz, Sébastien, Gietzen, Kimberly J., Hayes, Ben J., Lawley, Cynthia T., Sonstegard, Tad S., Van Tassell, Curtis P., VanRaden, Paul M., Viaud-Martinez, Karine A., Wiggans, George R.
Published in PloS one (28.03.2012)
Published in PloS one (28.03.2012)
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Journal Article
A Phrase Fill-in-Blank Problem in a Client-Side Web Programming Assistant System
Qi, Huiyu, Li, Zhikang, Funabiki, Nobuo, Sandi Kyaw, Htoo Htoo, Kao, Wen Chung
Published in Information (Basel) (20.08.2025)
Published in Information (Basel) (20.08.2025)
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Journal Article
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
Hesselberth, Jay R, Chen, Xiaoyu, Zhang, Zhihong, Sabo, Peter J, Sandstrom, Richard, Reynolds, Alex P, Thurman, Robert E, Neph, Shane, Kuehn, Michael S, Noble, William S, Fields, Stanley, Stamatoyannopoulos, John A
Published in Nature methods (01.04.2009)
Published in Nature methods (01.04.2009)
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Journal Article