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PyImageJ: A library for integrating ImageJ and Python
Rueden, Curtis T., Hiner, Mark C., Evans, Edward L., Pinkert, Michael A., Lucas, Alice M., Carpenter, Anne E., Cimini, Beth A., Eliceiri, Kevin W.
Published in Nature methods (01.11.2022)
Published in Nature methods (01.11.2022)
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Journal Article
Python tools for structural tasks in chemistry
Ryzhkov, Fedor V., Ryzhkova, Yuliya E., Elinson, Michail N.
Published in Molecular diversity (01.08.2025)
Published in Molecular diversity (01.08.2025)
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Journal Article
Towards understanding bugs in Python interpreters
Liu, Di, Feng, Yang, Yan, Yanyan, Xu, Baowen
Published in Empirical software engineering : an international journal (01.01.2023)
Published in Empirical software engineering : an international journal (01.01.2023)
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Journal Article
Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
Peng, Yun, Gao, Shuzheng, Gao, Cuiyun, Huo, Yintong, Lyu, Michael R.
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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Conference Proceeding
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article
SAB: An open-access Python-based integrated platform for fully automated emergent sustainability assessment of biorefineries
Zarafshani, Hanie, Watjanatepin, Ponnapat, Navare, Kranti, Sauve, Giovanna, Van Acker, Karel
Published in The international journal of life cycle assessment (01.04.2024)
Published in The international journal of life cycle assessment (01.04.2024)
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Journal Article
dr4pl: A Stable Convergence Algorithm for the 4 Parameter Logistic Model
An, Hyowon, Landis, Justin,T., Bailey, Aubrey,G., Marron, James,S., Dittmer, Dirk,P.
Published in The R journal (01.12.2019)
Published in The R journal (01.12.2019)
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Journal Article
Providers' utilization and perceptions of warfarin dosing algorithms
Gardner, Trevor, Vazquez, Sara R., Kim, Kibum, Jones, Aubrey E., Witt, Daniel M.
Published in Thrombosis research (01.11.2019)
Published in Thrombosis research (01.11.2019)
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Journal Article
PyRates—A Python framework for rate-based neural simulations
Gast, Richard, Rose, Daniel, Salomon, Christoph, Möller, Harald E., Weiskopf, Nikolaus, Knösche, Thomas R.
Published in PloS one (16.12.2019)
Published in PloS one (16.12.2019)
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Journal Article
pyMPSLib: A robust and scalable open-source Python library for mutiple-point statistical simulation
Chen, Qiyu, Zhou, Ruihong, Liu, Cui, Huang, Qianhong, Cui, Zhesi, Liu, Gang
Published in Earth science informatics (01.12.2023)
Published in Earth science informatics (01.12.2023)
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Journal Article