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FLOW-MAP: a graph-based, force-directed layout algorithm for trajectory mapping in single-cell time course datasets
Ko, Melissa E., Williams, Corey M., Fread, Kristen I., Goggin, Sarah M., Rustagi, Rohit S., Fragiadakis, Gabriela K., Nolan, Garry P., Zunder, Eli R.
Published in Nature protocols (01.02.2020)
Published in Nature protocols (01.02.2020)
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Journal Article
Simulated annealing aided genetic algorithm for gene selection from microarray data
Marjit, Shyam, Bhattacharyya, Trinav, Chatterjee, Bitanu, Sarkar, Ram
Published in Computers in biology and medicine (01.05.2023)
Published in Computers in biology and medicine (01.05.2023)
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Journal Article
Tellurium: An extensible python-based modeling environment for systems and synthetic biology
Choi, Kiri, Medley, J. Kyle, König, Matthias, Stocking, Kaylene, Smith, Lucian, Gu, Stanley, Sauro, Herbert M.
Published in BioSystems (01.09.2018)
Published in BioSystems (01.09.2018)
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Journal Article
Combining high throughput array synthesis and growth algorithm to discover TNF-α binders with new structures and properties
Lin, Weilin, Gandhi, Shanil, Bhattarai, Prabesh, Kasa, Keida, Kizil, Caghan, Zhang, Yixin
Published in European journal of medicinal chemistry (15.02.2023)
Published in European journal of medicinal chemistry (15.02.2023)
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Journal Article
Using gene expression to predict the secretome of differentiating human preadipocytes
Mutch, D.M, Rouault, C, Keophiphath, M, Lacasa, D, Clement, K
Published in International Journal of Obesity (01.03.2009)
Published in International Journal of Obesity (01.03.2009)
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Journal Article
High-throughput phenotyping with electronic medical record data using a common semi-supervised approach (PheCAP)
Zhang, Yichi, Cai, Tianrun, Yu, Sheng, Cho, Kelly, Hong, Chuan, Sun, Jiehuan, Huang, Jie, Ho, Yuk-Lam, Ananthakrishnan, Ashwin N., Xia, Zongqi, Shaw, Stanley Y., Gainer, Vivian, Castro, Victor, Link, Nicholas, Honerlaw, Jacqueline, Huang, Sicong, Gagnon, David, Karlson, Elizabeth W., Plenge, Robert M., Szolovits, Peter, Savova, Guergana, Churchill, Susanne, O’Donnell, Christopher, Murphy, Shawn N., Gaziano, J. Michael, Kohane, Isaac, Cai, Tianxi, Liao, Katherine P.
Published in Nature protocols (01.12.2019)
Published in Nature protocols (01.12.2019)
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Journal Article
A Study of Call Graph Construction for JVM-Hosted Languages
Ali, Karim, Lai, Xiaoni, Luo, Zhaoyi, Lhotak, Ondrej, Dolby, Julian, Tip, Frank
Published in IEEE transactions on software engineering (01.12.2021)
Published in IEEE transactions on software engineering (01.12.2021)
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Journal Article
Accurate and non-destructive monitoring of mold contamination in foodstuffs based on whole-cell biosensor array coupling with machine-learning prediction models
Ma, Junning, Guan, Yue, Xing, Fuguo, Eltzov, Evgeni, Wang, Yan, Li, Xu, Tai, Bowen
Published in Journal of hazardous materials (05.05.2023)
Published in Journal of hazardous materials (05.05.2023)
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Journal Article