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Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
Pinto, Dalila, Darvishi, Katayoon, Shi, Xinghua, Rajan, Diana, Rigler, Diane, Fitzgerald, Tom, Lionel, Anath C, Thiruvahindrapuram, Bhooma, MacDonald, Jeffrey R, Mills, Ryan, Prasad, Aparna, Noonan, Kristin, Gribble, Susan, Prigmore, Elena, Donahoe, Patricia K, Smith, Richard S, Park, Ji Hyeon, Hurles, Matthew E, Carter, Nigel P, Lee, Charles, Scherer, Stephen W, Feuk, Lars
Published in Nature biotechnology (01.06.2011)
Published in Nature biotechnology (01.06.2011)
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Journal Article
The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists
Huang, Da Wei, Sherman, Brad T, Tan, Qina, Collins, Jack R, Alvord, W Gregory, Roayaei, Jean, Stephens, Robert, Baseler, Michael W, Lane, H Clifford, Lempicki, Richard A
Published in Genome biology (04.09.2007)
Published in Genome biology (04.09.2007)
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Journal Article
The eMERGE Network: A consortium of biorepositories linked to electronic medical records data for conducting genomic studies
McCarty, Catherine A, Chisholm, Rex L, Chute, Christopher G, Kullo, Iftikhar J, Jarvik, Gail P, Larson, Eric B, Li, Rongling, Masys, Daniel R, Ritchie, Marylyn D, Roden, Dan M, Struewing, Jeffery P, Wolf, Wendy A
Published in BMC genomics (26.01.2011)
Published in BMC genomics (26.01.2011)
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Journal Article
The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo
Bonneau, Richard, Reiss, David J, Shannon, Paul, Facciotti, Marc, Hood, Leroy, Baliga, Nitin S, Thorsson, Vesteinn
Published in Genome biology (10.05.2006)
Published in Genome biology (10.05.2006)
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Journal Article
MXene/WO 3 Sensor Array with Improved SNN Algorithm for Accurate Identification of Toxic Gases
Guo, Liangchao, Wang, Junke, Han, Haoran, Wang, Peng, Lu, Yunxiang, Yuan, Qilong, Du, Chunyu, Yin, Shuo, Zhou, Ye, Zhang, Chao
Published in ACS applied materials & interfaces (13.11.2024)
Published in ACS applied materials & interfaces (13.11.2024)
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Journal Article
MicrobesOnline: an integrated portal for comparative and functional genomics
Dehal, Paramvir S, Joachimiak, Marcin P, Price, Morgan N, Bates, John T, Baumohl, Jason K, Chivian, Dylan, Friedland, Greg D, Huang, Katherine H, Keller, Keith, Novichkov, Pavel S, Dubchak, Inna L, Alm, Eric J, Arkin, Adam P
Published in Nucleic acids research (01.01.2010)
Published in Nucleic acids research (01.01.2010)
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Journal Article
Combined pathologic‐genomic algorithm for early-stage breast cancer improves cost-effective use of the 21-gene recurrence score assay
Gage, M.M., Mylander, W.C., Rosman, M., Fujii, T., Le Du, F., Raghavendra, A., Sinha, A.K., Espinosa Fernandez, J.R., James, A., Ueno, N.T., Tafra, L., Jackson, R.S.
Published in Annals of oncology (01.05.2018)
Published in Annals of oncology (01.05.2018)
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Journal Article
A binary search approach to whole-genome data analysis
Brodsky, Leonid, Kogan, Simon, BenJacob, Eshel, Nevo, Eviatar
Published in Proceedings of the National Academy of Sciences - PNAS (28.09.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (28.09.2010)
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Journal Article
Core Signaling Pathways in Human Pancreatic Cancers Revealed by Global Genomic Analyses
Published in Science (American Association for the Advancement of Science)
(26.09.2008)
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Journal Article
Genomic characteristics of cattle copy number variations
Hou, Yali, Liu, George E, Bickhart, Derek M, Cardone, Maria Francesca, Wang, Kai, Kim, Eui-soo, Matukumalli, Lakshmi K, Ventura, Mario, Song, Jiuzhou, VanRaden, Paul M, Sonstegard, Tad S, Van Tassell, Curt P
Published in BMC genomics (23.02.2011)
Published in BMC genomics (23.02.2011)
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Journal Article
An optimized algorithm for detecting and annotating regional differential methylation
Li, Sheng, Garrett-Bakelman, Francine E, Akalin, Altuna, Zumbo, Paul, Levine, Ross, To, Bik L, Lewis, Ian D, Brown, Anna L, D'Andrea, Richard J, Melnick, Ari, Mason, Christopher E
Published in BMC bioinformatics (10.04.2013)
Published in BMC bioinformatics (10.04.2013)
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Journal Article
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
Hesselberth, Jay R, Chen, Xiaoyu, Zhang, Zhihong, Sabo, Peter J, Sandstrom, Richard, Reynolds, Alex P, Thurman, Robert E, Neph, Shane, Kuehn, Michael S, Noble, William S, Fields, Stanley, Stamatoyannopoulos, John A
Published in Nature methods (01.04.2009)
Published in Nature methods (01.04.2009)
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Journal Article
Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array
Slieker, Roderick C, Bos, Steffan D, Goeman, Jelle J, Bovée, Judith VMG, Talens, Rudolf P, van der Breggen, Ruud, Suchiman, H Eka D, Lameijer, Eric-Wubbo, Putter, Hein, van den Akker, Erik B, Zhang, Yanju, Jukema, J Wouter, Slagboom, P Eline, Meulenbelt, Ingrid, Heijmans, Bastiaan T
Published in Epigenetics & chromatin (06.08.2013)
Published in Epigenetics & chromatin (06.08.2013)
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Journal Article
Comprehensive genomic filtering algorithm to expose the cause of skewed X chromosome inactivation. The proof of concept in female haemophilia expression
Ziegler, Betiana Michelle, Abelleyro, Miguel Martin, Marchione, Vanina Daniela, Lazarte, Nicolás, Ledesma, Martín Manuel, Elhelou, Ludmila, Neme, Daniela, Rossetti, Liliana Carmen, Medina-Acosta, Enrique, Giliberto, Florencia, De Brasi, Carlos, Radic, Claudia Pamela
Published in Journal of medical genetics (01.08.2024)
Published in Journal of medical genetics (01.08.2024)
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Journal Article