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Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
Pinto, Dalila, Darvishi, Katayoon, Shi, Xinghua, Rajan, Diana, Rigler, Diane, Fitzgerald, Tom, Lionel, Anath C, Thiruvahindrapuram, Bhooma, MacDonald, Jeffrey R, Mills, Ryan, Prasad, Aparna, Noonan, Kristin, Gribble, Susan, Prigmore, Elena, Donahoe, Patricia K, Smith, Richard S, Park, Ji Hyeon, Hurles, Matthew E, Carter, Nigel P, Lee, Charles, Scherer, Stephen W, Feuk, Lars
Published in Nature biotechnology (01.06.2011)
Published in Nature biotechnology (01.06.2011)
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Journal Article
Multi-qubit entanglement and algorithms on a neutral-atom quantum computer
Graham, T. M., Song, Y., Scott, J., Poole, C., Phuttitarn, L., Jooya, K., Eichler, P., Jiang, X., Marra, A., Grinkemeyer, B., Kwon, M., Ebert, M., Cherek, J., Lichtman, M. T., Gillette, M., Gilbert, J., Bowman, D., Ballance, T., Campbell, C., Dahl, E. D., Crawford, O., Blunt, N. S., Rogers, B., Noel, T., Saffman, M.
Published in Nature (London) (21.04.2022)
Published in Nature (London) (21.04.2022)
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Journal Article
FLOW-MAP: a graph-based, force-directed layout algorithm for trajectory mapping in single-cell time course datasets
Ko, Melissa E., Williams, Corey M., Fread, Kristen I., Goggin, Sarah M., Rustagi, Rohit S., Fragiadakis, Gabriela K., Nolan, Garry P., Zunder, Eli R.
Published in Nature protocols (01.02.2020)
Published in Nature protocols (01.02.2020)
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Journal Article
A community effort to assess and improve drug sensitivity prediction algorithms
Costello, James C, Heiser, Laura M, Georgii, Elisabeth, Gönen, Mehmet, Menden, Michael P, Wang, Nicholas J, Bansal, Mukesh, Ammad-ud-din, Muhammad, Hintsanen, Petteri, Khan, Suleiman A, Mpindi, John-Patrick, Kallioniemi, Olli, Honkela, Antti, Aittokallio, Tero, Wennerberg, Krister, Collins, James J, Gallahan, Dan, Singer, Dinah, Saez-Rodriguez, Julio, Kaski, Samuel, Gray, Joe W, Stolovitzky, Gustavo
Published in Nature biotechnology (01.12.2014)
Published in Nature biotechnology (01.12.2014)
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Journal Article
Detection of multiple metal ions in water with a fluorescence sensor based on carbon quantum dots assisted by stepwise prediction and machine learning
Liu, Yuying, Chen, Jiao, Xu, Zijun, Liu, Hao, Yuan, Tingting, Wang, Xiyuan, Wei, Jianjie, Shi, Qingdong
Published in Environmental chemistry letters (01.12.2022)
Published in Environmental chemistry letters (01.12.2022)
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Journal Article
Photoprogrammed Multifunctional Optoelectronic Synaptic Transistor Arrays Based on Photosensitive Polymer‐Sorted Semiconducting Single‐Walled Carbon Nanotubes for Image Recognition
Sui, Nianzi, Ji, Yixi, Li, Min, Zheng, Fanyuan, Shao, Shuangshuang, Li, Jiaqi, Liu, Zhaoxin, Wu, Jinjian, Zhao, Jianwen, Li, Lain‐Jong
Published in Advanced science (01.08.2024)
Published in Advanced science (01.08.2024)
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Journal Article
Optimal mileage-based PV array reconfiguration using swarm reinforcement learning
Zhang, Xiaoshun, Li, Chuanzhi, Li, Zilin, Yin, Xueqiu, Yang, Bo, Gan, Lingxiao, Yu, Tao
Published in Energy conversion and management (15.03.2021)
Published in Energy conversion and management (15.03.2021)
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Journal Article
Parallelized computational 3D video microscopy of freely moving organisms at multiple gigapixels per second
Zhou, Kevin C., Harfouche, Mark, Cooke, Colin L., Park, Jaehee, Konda, Pavan C., Kreiss, Lucas, Kim, Kanghyun, Jönsson, Joakim, Doman, Thomas, Reamey, Paul, Saliu, Veton, Cook, Clare B., Zheng, Maxwell, Bechtel, John P., Bègue, Aurélien, McCarroll, Matthew, Bagwell, Jennifer, Horstmeyer, Gregor, Bagnat, Michel, Horstmeyer, Roarke
Published in Nature photonics (01.05.2023)
Published in Nature photonics (01.05.2023)
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Journal Article
Systematic evaluation of factors influencing ChIP-seq fidelity
Chen, Yiwen, Negre, Nicolas, Li, Qunhua, Mieczkowska, Joanna O, Slattery, Matthew, Liu, Tao, Zhang, Yong, Kim, Tae-Kyung, He, Housheng Hansen, Zieba, Jennifer, Ruan, Yijun, Bickel, Peter J, Myers, Richard M, Wold, Barbara J, White, Kevin P, Lieb, Jason D, Liu, X Shirley
Published in Nature methods (01.06.2012)
Published in Nature methods (01.06.2012)
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Journal Article
Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning
Jones, Thouis R, Carpenter, Anne E, Lamprecht, Michael R, Moffat, Jason, Silver, Serena J, Grenier, Jennifer K, Castoreno, Adam B, Eggert, Ulrike S, Root, David E, Golland, Polina, Sabatini, David M
Published in Proceedings of the National Academy of Sciences - PNAS (10.02.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (10.02.2009)
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Journal Article
Microarray analysis of microrna expression in peripheral blood mononuclear cells of patients with polymyositis and dermatomyositis
Shi, Jia, Zhou, Shuang, Zhao, Jiuliang, Xu, Dong, Huang, Hui, Li, Mengtao, Tian, Xinping, He, Linrong, Wu, Chanyuan, Wang, Qian, Zhao, Yan, Zeng, Xiaofeng
Published in Journal of translational internal medicine (01.04.2024)
Published in Journal of translational internal medicine (01.04.2024)
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Journal Article
Advances in Miniaturized Computational Spectrometers
Xue, Qian, Yang, Yang, Ma, Wenkai, Zhang, Hanqiu, Zhang, Daoli, Lan, Xinzheng, Gao, Liang, Zhang, Jianbing, Tang, Jiang
Published in Advanced science (01.12.2024)
Published in Advanced science (01.12.2024)
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Journal Article
A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis
Down, Thomas A, Rakyan, Vardhman K, Turner, Daniel J, Flicek, Paul, Li, Heng, Kulesha, Eugene, Gräf, Stefan, Johnson, Nathan, Herrero, Javier, Tomazou, Eleni M, Thorne, Natalie P, Bäckdahl, Liselotte, Herberth, Marlis, Howe, Kevin L, Jackson, David K, Miretti, Marcos M, Marioni, John C, Birney, Ewan, Hubbard, Tim J P, Durbin, Richard, Tavaré, Simon, Beck, Stephan
Published in Nature biotechnology (01.07.2008)
Published in Nature biotechnology (01.07.2008)
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Journal Article
Nanostring-Based Multigene Assay to Predict Recurrence for Gastric Cancer Patients after Surgery
Lee, Jeeyun, Sohn, Insuk, Do, In-Gu, Kim, Kyoung-Mee, Park, Se Hoon, Park, Joon Oh, Park, Young Suk, Lim, Ho Yeong, Sohn, Tae Sung, Bae, Jae Moon, Choi, Min Gew, Lim, Do Hoon, Min, Byung Hoon, Lee, Joon Haeng, Rhee, Poong Lyul, Kim, Jae J., Choi, Dong Il, Tan, Iain Beehuat, Das, Kakoli, Tan, Patrick, Jung, Sin Ho, Kang, Won Ki, Kim, Sung
Published in PloS one (05.03.2014)
Published in PloS one (05.03.2014)
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Journal Article
Discovery of novel variants in genotyping arrays improves genotype retention and reduces ascertainment bias
Didion, John P, Yang, Hyuna, Sheppard, Keith, Fu, Chen-Ping, McMillan, Leonard, de Villena, Fernando Pardo-Manuel, Churchill, Gary A
Published in BMC genomics (19.01.2012)
Published in BMC genomics (19.01.2012)
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Journal Article