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pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
Behdenna, Abdelkader, Colange, Maximilien, Haziza, Julien, Gema, Aryo, Appé, Guillaume, Azencott, Chloé-Agathe, Nordor, Akpéli
Published in BMC bioinformatics (07.12.2023)
Published in BMC bioinformatics (07.12.2023)
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Journal Article
MetPy: A Meteorological Python Library for Data Analysis and Visualization
May, Ryan M., Goebbert, Kevin H., Thielen, Jonathan E., Leeman, John R., Camron, M. Drew, Bruick, Zachary, Bruning, Eric C., Manser, Russell P., Arms, Sean C., Marsh, Patrick T.
Published in Bulletin of the American Meteorological Society (01.10.2022)
Published in Bulletin of the American Meteorological Society (01.10.2022)
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Journal Article
LGHAP: the Long-term Gap-free High-resolution Air Pollutant concentration dataset, derived via tensor-flow-based multimodal data fusion
Bai, Kaixu, Li, Ke, Ma, Mingliang, Li, Kaitao, Li, Zhengqiang, Guo, Jianping, Chang, Ni-Bin, Tan, Zhuo, Han, Di
Published in Earth system science data (24.02.2022)
Published in Earth system science data (24.02.2022)
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Journal Article
COBRApy: COnstraints-Based Reconstruction and Analysis for Python
Ebrahim, Ali, Lerman, Joshua A, Palsson, Bernhard O, Hyduke, Daniel R
Published in BMC systems biology (08.08.2013)
Published in BMC systems biology (08.08.2013)
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Journal Article
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article
Development and evaluation of GIS-based runoff and sediment yield watershed scale model
Yousuf, Abrar, Bhardwaj, Anil, Yousuf, Faizaan
Published in Arabian journal of geosciences (01.10.2022)
Published in Arabian journal of geosciences (01.10.2022)
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Journal Article
SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)
Published in Nature methods (01.03.2020)
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Journal Article
lca_algebraic: a library bringing symbolic calculus to LCA for comprehensive sensitivity analysis
Jolivet, Raphaël, Clavreul, Julie, Brière, Raphaël, Besseau, Romain, Prieur Vernat, Anne, Sauze, Marie, Blanc, Isabelle, Douziech, Mélanie, Pérez-López, Paula
Published in The international journal of life cycle assessment (01.12.2021)
Published in The international journal of life cycle assessment (01.12.2021)
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Journal Article
A novel riboswitch classification based on imbalanced sequences achieved by machine learning
Beyene, Solomon Shiferaw, Ling, Tianyi, Ristevski, Blagoj, Chen, Ming
Published in PLoS computational biology (01.07.2020)
Published in PLoS computational biology (01.07.2020)
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Journal Article
Screening for Parkinson’s disease using “computer vision”
Kasemsap, Narongrit, Tikkapanyo, Purinat, Wanjantuk, Panupong, Vorasoot, Nisa, Kongbunkiat, Kannikar, Panitchote, Anupol
Published in PloS one (12.08.2025)
Published in PloS one (12.08.2025)
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Journal Article