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    MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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          SVM-based prediction of linear B-cell epitopes using Bayes Feature Extraction
                                      
                                            Wee, Lawrence JK,                              Simarmata, Diane,                              Kam, Yiu-Wing,                              Ng, Lisa FP,                              Tong, Joo Chuan                              
Published in BMC genomics (02.12.2010)
                   
      
      
                                                  Published in BMC genomics (02.12.2010)
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          Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus
                                      
                                            Bell, Christopher G.,                              Finer, Sarah,                              Lindgren, Cecilia M.,                              Wilson, Gareth A.,                              Rakyan, Vardhman K.,                              Teschendorff, Andrew E.,                              Akan, Pelin,                              Stupka, Elia,                              Down, Thomas A.,                              Prokopenko, Inga,                              Morison, Ian M.,                              Mill, Jonathan,                              Pidsley, Ruth,                              Deloukas, Panos,                              Frayling, Timothy M.,                              Hattersley, Andrew T.,                              McCarthy, Mark I.,                              Beck, Stephan,                              Hitman, Graham A.                              
Published in PloS one (18.11.2010)
                   
      
      
                                                  Published in PloS one (18.11.2010)
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          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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          A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis
                                      
                                            Down, Thomas A,                              Rakyan, Vardhman K,                              Turner, Daniel J,                              Flicek, Paul,                              Li, Heng,                              Kulesha, Eugene,                              Gräf, Stefan,                              Johnson, Nathan,                              Herrero, Javier,                              Tomazou, Eleni M,                              Thorne, Natalie P,                              Bäckdahl, Liselotte,                              Herberth, Marlis,                              Howe, Kevin L,                              Jackson, David K,                              Miretti, Marcos M,                              Marioni, John C,                              Birney, Ewan,                              Hubbard, Tim J P,                              Durbin, Richard,                              Tavaré, Simon,                              Beck, Stephan                              
Published in Nature biotechnology (01.07.2008)
                   
      
      
                                                  Published in Nature biotechnology (01.07.2008)
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          PEPMatch: a tool to identify short peptide sequence matches in large sets of proteins
                                      
                                            Marrama, Daniel,                              Chronister, William D.,                              Westernberg, Luise,                              Vita, Randi,                              Koşaloğlu-Yalçın, Zeynep,                              Sette, Alessandro,                              Nielsen, Morten,                              Greenbaum, Jason A.,                              Peters, Bjoern                              
Published in BMC bioinformatics (18.12.2023)
                   
      
      
                                                  Published in BMC bioinformatics (18.12.2023)
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          QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditions
                                      
                                            Liu, Bin,                              Yi, Jimmy,                              SV, Aishwarya,                              Lan, Xun,                              Ma, Yilin,                              Huang, Tim HM,                              Leone, Gustavo,                              Jin, Victor X                              
Published in BMC genomics (09.12.2013)
                   
      
      
                                                  Published in BMC genomics (09.12.2013)
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          Empirical Bayes PCA in high dimensions
                                      
                                            Zhong, Xinyi,                              Su, Chang,                              Fan, Zhou                              
Published in Journal of the Royal Statistical Society. Series B, Statistical methodology (01.07.2022)
                   
      
      
                                                  Published in Journal of the Royal Statistical Society. Series B, Statistical methodology (01.07.2022)
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          gmxapi: A GROMACS-native Python interface for molecular dynamics with ensemble and plugin support
                                      
                                            Irrgang, M. Eric,                              Davis, Caroline,                              Kasson, Peter M.                              
Published in PLoS computational biology (01.02.2022)
                   
      
      
                                                  Published in PLoS computational biology (01.02.2022)
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          Accelerated sparsity based reconstruction of compressively sensed multichannel EEG signals
                                      
                                            Tayyib, Muhammad,                              Amir, Muhammad,                              Javed, Umer,                              Akram, M. Waseem,                              Yousufi, Mussyab,                              Qureshi, Ijaz M.,                              Abdullah, Suheel,                              Ullah, Hayat                              
Published in PloS one (07.01.2020)
                   
      
      
                                                  Published in PloS one (07.01.2020)
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          Convex Optimization, Shape Constraints, Compound Decisions, and Empirical Bayes Rules
                                      
                                            Koenker, Roger,                              Mizera, Ivan                              
Published in Journal of the American Statistical Association (01.06.2014)
                   
      
      
                                                  Published in Journal of the American Statistical Association (01.06.2014)
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