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Faster Mean-shift: GPU-accelerated clustering for cosine embedding-based cell segmentation and tracking
Zhao, Mengyang, Jha, Aadarsh, Liu, Quan, Millis, Bryan A., Mahadevan-Jansen, Anita, Lu, Le, Landman, Bennett A., Tyska, Matthew J., Huo, Yuankai
Published in Medical image analysis (01.07.2021)
Published in Medical image analysis (01.07.2021)
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Journal Article
Pan-cancer analysis reveals CCL5/CSF2 as potential predictive biomarkers for immune checkpoint inhibitors
Chen, Yi-Chao, Zheng, Wei-Zhong, Liu, Chun-Peng, Zhao, Yong-Qiang, Li, Jun-Wei, Du, Ze-Sen, Zhai, Tian-Tian, Lin, Hao-Yu, Shi, Wen-Qi, Cai, Shan-Qing, Pan, Feng, Qiu, Si-Qi
Published in Cancer cell international (10.09.2024)
Published in Cancer cell international (10.09.2024)
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Journal Article
COFFEE: consensus single cell-type specific inference for gene regulatory networks
K Lodi, Musaddiq, Chernikov, Anna, Ghosh, Preetam
Published in Briefings in bioinformatics (23.09.2024)
Published in Briefings in bioinformatics (23.09.2024)
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Journal Article
Integrating multi-omics and machine learning survival frameworks to build a prognostic model based on immune function and cell death patterns in a lung adenocarcinoma cohort
Xie, Yiluo, Chen, Huili, Tian, Mei, Wang, Ziqang, Wang, Luyao, Zhang, Jing, Wang, Xiaojing, Lian, Chaoqun
Published in Frontiers in immunology (2024)
Published in Frontiers in immunology (2024)
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Journal Article
Clustering analysis revealed the autophagy classification and potential autophagy regulators' sensitivity of pancreatic cancer based on multi‐omics data
Chen, Yonghao, Meng, Jialin, Lu, Xiaofan, Li, Xiao, Wang, Chunhui
Published in Cancer medicine (Malden, MA) (01.01.2023)
Published in Cancer medicine (Malden, MA) (01.01.2023)
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Journal Article
A Deep Learning Model to Predict Breast Implant Texture Types Using Ultrasonography Images: Feasibility Development Study
Kim, Ho Heon, Jeong, Won Chan, Pi, Kyungran, Lee, Angela Soeun, Kim, Min Soo, Kim, Hye Jin, Kim, Jae Hong
Published in JMIR formative research (05.11.2024)
Published in JMIR formative research (05.11.2024)
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Journal Article
A Taxonomy of Bacterial Microcompartment Loci Constructed by a Novel Scoring Method
Axen, Seth D., Erbilgin, Onur, Kerfeld, Cheryl A.
Published in PLoS computational biology (01.10.2014)
Published in PLoS computational biology (01.10.2014)
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Journal Article
The Cole relaxation frequency as a parameter to identify cancer in breast tissue
Gregory, W. D., Marx, J. J., Gregory, C. W., Mikkelson, W. M., Tjoe, J. A., Shell, J.
Published in Medical physics (Lancaster) (01.07.2012)
Published in Medical physics (Lancaster) (01.07.2012)
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Journal Article
A critical assessment of clustering algorithms to improve cell clustering and identification in single-cell transcriptome study
Liang, Xiao, Cao, Lijie, Chen, Hao, Wang, Lidan, Wang, Yangyun, Fu, Lijuan, Tan, Xiaqin, Chen, Enxiang, Ding, Yubin, Tang, Jing
Published in Briefings in bioinformatics (01.01.2024)
Published in Briefings in bioinformatics (01.01.2024)
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Journal Article
scMGATGRN: a multiview graph attention network–based method for inferring gene regulatory networks from single-cell transcriptomic data
Yuan, Lin, Zhao, Ling, Jiang, Yufeng, Shen, Zhen, Zhang, Qinhu, Zhang, Ming, Zheng, Chun-Hou, Huang, De-Shuang
Published in Briefings in bioinformatics (23.09.2024)
Published in Briefings in bioinformatics (23.09.2024)
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Journal Article
Integrated Multiomics Analysis and Machine Learning Approaches in Bladder Cancer: Unveiling the Impact of Immunogenic Cell Death and Its Key Gene SLC2A3 on Prognosis and Personalized Treatment Strategies
Sun, Mouyuan, Zhang, Quanjie, He, Zhixu, Luo, Yaxian, Tu, Yan, Peng, Lianjie, Mao, Huchao, Zhang, Jingyu, Qiu, Tao, Zhang, Yan
Published in ACS omega (17.06.2025)
Published in ACS omega (17.06.2025)
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Journal Article
SU‐E‐T‐481: Dosimetric Comparison of Acuros XB and Anisotropic Analytic Algorithm with Commercial Monte Carlo Based Dose Calculation Algorithm for Stereotactic Body Radiation Therapy of Lung Cancer
Cao, M, Tenn, S, Lee, C, Yang, Y, Lamb, J, Agazaryan, N, Lee, P, Low, D
Published in Medical physics (Lancaster) (01.06.2014)
Published in Medical physics (Lancaster) (01.06.2014)
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Journal Article
Consensus clustering and development of a risk signature based on trajectory differential genes of cancer-associated fibroblast subpopulations in colorectal cancer
Yu, Ke, Wang, Jiao, Wang, Yueqing, He, Jiayi, Hu, Shangshang, Kuai, Shougang
Published in Journal of cancer research and clinical oncology (09.08.2024)
Published in Journal of cancer research and clinical oncology (09.08.2024)
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Journal Article
Kinetics of the Reduction of 4‑Nitrophenol by Silver Nanoparticles Immobilized in Thermoresponsive Core–Shell Nanoreactors
Besold, Daniel, Risse, Sebastian, Lu, Yan, Dzubiella, Joachim, Ballauff, Matthias
Published in Industrial & engineering chemistry research (17.03.2021)
Published in Industrial & engineering chemistry research (17.03.2021)
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Journal Article