Practical handbook of the biology and molecular diversity of Trichoderma species from Tropical regions

This book analyzes the right pathway to solve the controversial identifications of some Trichoderma species on the basis of sampling procedures, slide culture techniques, macroscopic and microscopic analysis, and molecular tools. Most species of the genus Trichoderma grow rapidly in artificial cultu...

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Bibliographic Details
Main Author Siddiquee, Shafiquzzaman (Author)
Format Electronic eBook
LanguageEnglish
Published Cham, Switzerland : Springer, 2017.
SeriesFungal biology (Springer (Firm))
Subjects
Online AccessFull text
ISBN9783319649467
9783319649450
Physical Description1 online resource

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Table of Contents:
  • Preface; Contents; About the Author; Chapter 1: The Basic Concept of Microbiology; 1.1 Aseptic Technique and Safety; 1.2 Good Microbiological Laboratory Practices (GMLP); 1.3 Risk Assessment; 1.4 Spillage Management; 1.4.1 Spills; 1.4.2 Broken Glass; 1.4.3 Splashes on Clothing and the Skin; 1.5 Resources; 1.5.1 Equipment (Source: ASE 2001); 1.5.2 Apparatus (Source: ASE 2001); 1.5.3 Materials (Source: ASE 2001); 1.6 Flaming the Needle/Loop; 1.7 Flaming the Neck of Bottles/Test Tubes; 1.8 Media; 1.8.1 Preparation of Culture Media; 1.8.2 Pouring a Petri Plate; 1.8.3 Agar Slants.
  • 1.8.4 Storage of Prepared Media1.9 Disinfectants; 1.10 Incubation; 1.11 Accidents; 1.12 Emergency Preparation and Response; References; Chapter 2: Collection and Processing for Trichoderma Specimen; 2.1 Introduction; 2.2 Media for Isolating of Trichoderma; 2.2.1 Trichoderma Selective Media; 2.2.2 T. harzianum-Selective Medium (THSM); 2.2.3 Rose Bengal Agar (RBA); 2.3 Materials; 2.4 Methods; 2.4.1 Sample Collection Procedures; 2.4.2 Isolation of Trichoderma Colony; 2.4.3 Sample Dilution; 2.4.4 Culturing Plates; 2.4.5 Preparation of Slant Media; 2.4.6 Slant Culture.
  • 2.5 Identification of Trichoderma Isolates2.6 Pure Culture of Trichoderma Isolates; 2.7 Direct Culture Methods; 2.8 Storage of Trichoderma; 2.8.1 Storage in Water; 2.8.2 Cold Temperature; 2.8.3 Under Mineral Oil; 2.8.4 Freeze Drying or Lyophilization; 2.8.5 Low-Temperature Storage; References; Chapter 3: Slide Culturing of Trichoderma Isolates; 3.1 Introduction; 3.2 Materials; 3.3 Procedure; 3.3.1 Slide Culture Technique I; 3.3.2 Slide Culture Technique II; Chapter 4: Morphology-Based Characterization of Trichoderma Species; 4.1 Introduction.
  • 4.2 Definitions and Taxonomic Value of Morphological Traits4.2.1 Teleomorph; 4.2.2 Cultures; 4.2.3 Growth Media; 4.2.4 Growth Plates/Colonies; 4.2.5 Growth Plates/Conidiation; 4.2.6 Conidial Heads, Wet Versus Dry; 4.2.7 Conidiophores/Trees, Regular; 4.2.8 Conidiophore Terminology (Source: Jaklitsch 2009); 4.2.9 Effuse Conidiation (Synanamorphs); 4.2.10 Pustules; 4.2.11 Shrubs, Granules; 4.2.12 Tufts, Also Called "Fluffy Tufts"; 4.3 Macroscopic Analysis; 4.3.1 Trichoderma asperellum; 4.3.2 Trichoderma harzianum; 4.3.3 Trichoderma hamatum; 4.3.4 Trichoderma reesei.
  • 4.3.5 Trichoderma longibrachiatum4.3.6 Trichoderma spirale; 4.3.7 Trichoderma brevicompactum; 4.3.8 Trichoderma erinaceum; 4.3.9 Trichoderma koningiopis; 4.3.10 Trichoderma melanomagna; 4.3.11 Trichoderma viride; 4.3.12 Trichoderma theobromicola; References; Chapter 5: Molecular Characteristics of Trichoderma Strains; 5.1 Molecular Analysis; 5.2 DNA Extraction and Purification; 5.3 Obtaining Materials from Which to Extract DNA; 5.3.1 Trichoderma Culture; 5.3.2 Trichoderma Liquid Culture; 5.4 DNA Extraction Protocols; 5.4.1 Phenol-Chloroform Method.